Microbacterium testaceum_C
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium testaceum_C
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium testaceum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium testaceum
NCBI Strain Identifiers NS220
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 97.61%
CheckM Contamination 0.51%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 291
N50 Contigs 32,160 bp
Longest Contig 108,698 bp
Scaffold Count 291
N50 Scaffolds 32,160 bp
Longest Scaffold 108,698 bp
Genome Size 4,022,397 bp
Protein Count 3,892
Coding Density 90.87%
GC Percentage 69.89%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147665v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03401348
Country India
Date 2015-12-22
Genbank Assembly Accession GCA_001476655.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,798
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 2033
SSU Count 1
Submitter Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
Taxid 2033
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDRT00000000.1