Methylobacterium indicum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Beijerinckiaceae; g__Methylobacterium; s__Methylobacterium indicum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Methylobacterium; s__Methylobacterium indicum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Methylobacterium; s__Methylobacterium indicum
NCBI Strain Identifiers NS228
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001043895.1)
Genome Characteristics
CheckM Completeness 97.62%
CheckM Contamination 0.63%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 487
N50 Contigs 29,045 bp
Longest Contig 146,306 bp
Scaffold Count 487
N50 Scaffolds 29,045 bp
Longest Scaffold 146,306 bp
Genome Size 6,322,079 bp
Protein Count 5,990
Coding Density 86.15%
GC Percentage 70.92%
Ambiguous Bases N/A
GTDB representative GCA_001043895.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147661v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03401376
Country India
Date 2015-12-22
Genbank Assembly Accession GCA_001476615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,896
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 1775910
SSU Count 5
Submitter Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
Taxid 1775910
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDRL00000000.1