Microbacterium testaceum_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium testaceum_B
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium testaceum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium testaceum
NCBI Strain Identifiers NS183
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001476285.1)
Genome Characteristics
CheckM Completeness 97.81%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 305
N50 Contigs 37,174 bp
Longest Contig 117,585 bp
Scaffold Count 305
N50 Scaffolds 37,174 bp
Longest Scaffold 117,585 bp
Genome Size 3,942,168 bp
Protein Count 3,805
Coding Density 91.24%
GC Percentage 69.88%
Ambiguous Bases N/A
GTDB representative GCA_001476285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147627v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03401346
Country India
Date 2015-12-22
Genbank Assembly Accession GCA_001476275.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,715
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 2033
SSU Count 1
Submitter Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
Taxid 2033
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDRR00000000.1