Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Micrococcaceae; g__Rothia; s__Rothia kristinae
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Micrococcaceae; g__Rothia; s__Rothia kristinae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Micrococcaceae; g__Rothia; s__Rothia kristinae
NCBI Strain Identifiers SA15
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001570865.1)
Genome Characteristics
CheckM Completeness 96.03%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 211
N50 Contigs 19,130 bp
Longest Contig 59,173 bp
Scaffold Count 211
N50 Scaffolds 19,130 bp
Longest Scaffold 59,173 bp
Genome Size 2,265,036 bp
Protein Count 2,078
Coding Density 89.65%
GC Percentage 71.80%
Ambiguous Bases N/A
GTDB representative GCA_001570865.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147620v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03401338
Country India
Date 2015-12-22
Genbank Assembly Accession GCA_001476205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,014
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 37923
SSU Count 1
Submitter Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
Taxid 37923
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDRJ00000000.1