Exiguobacterium_A acetylicum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Exiguobacterales; f__Exiguobacteraceae; g__Exiguobacterium_A; s__Exiguobacterium_A acetylicum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__; g__Exiguobacterium; s__Exiguobacterium indicum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; x__Bacillales incertae sedis; x__Bacillales Family XII. Incertae Sedis; g__Exiguobacterium; s__Exiguobacterium indicum
NCBI Strain Identifiers RSA42
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000702605.1)
Genome Characteristics
CheckM Completeness 97.81%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 100.0
5S Count 2
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 126
N50 Contigs 69,291 bp
Longest Contig 326,370 bp
Scaffold Count 126
N50 Scaffolds 69,291 bp
Longest Scaffold 326,370 bp
Genome Size 3,095,093 bp
Protein Count 3,243
Coding Density 90.01%
GC Percentage 47.35%
Ambiguous Bases N/A
GTDB representative GCA_000702605.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147569v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03401351
Country India
Date 2015-12-22
Genbank Assembly Accession GCA_001475695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,167
Refseq Category na
Seq Rel Date 2015/12/22
Spanned Gaps 0
Species Taxid 296995
SSU Count 2
Submitter Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
Taxid 296995
Total Gap Length 0
Translation Table 11
tRNA Count (total) 65
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDQW00000000.1