Enterobacter himalayensis
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter himalayensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter hormaechei
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; x__Enterobacter cloacae complex; s__Enterobacter hormaechei; sb__Enterobacter hormaechei subsp. steigerwaltii
NCBI Strain Identifiers SMART_1139
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002003685.1)
Genome Characteristics
CheckM Completeness 99.77%
CheckM Contamination 0.52%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 76
N50 Contigs 191,427 bp
Longest Contig 1,296,717 bp
Scaffold Count 76
N50 Scaffolds 191,427 bp
Longest Scaffold 1,296,717 bp
Genome Size 5,050,732 bp
Protein Count 4,782
Coding Density 89.42%
GC Percentage 55.34%
Ambiguous Bases N/A
GTDB representative GCA_002003685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SMART_1139.v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04252958
Country Colombia
Date 2015-12-21
Genbank Assembly Accession GCA_001475395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,924
Refseq Category na
Seq Rel Date 2015/12/21
Spanned Gaps 0
Species Taxid 158836
SSU Count 1
Submitter JCVI
Taxid 299766
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPOC00000000.1