Photorhabdus laumondii
Isolate HQ 5S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Photorhabdus; s__Photorhabdus laumondii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Photorhabdus; s__Photorhabdus laumondii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Photorhabdus; s__Photorhabdus laumondii; sb__Photorhabdus laumondii subsp. laumondii
NCBI Strain Identifiers HP88
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003343245.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 0
23S Count 2
tRNA Count 18
Contig Count 287
N50 Contigs 38,130 bp
Longest Contig 196,697 bp
Scaffold Count 287
N50 Scaffolds 38,130 bp
Longest Scaffold 196,697 bp
Genome Size 5,268,230 bp
Protein Count 4,723
Coding Density 83.47%
GC Percentage 42.44%
Ambiguous Bases 1,965
GTDB representative GCA_003343245.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147324v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03579669
Country USA: Utah
Date 2015-12-21
Genbank Assembly Accession GCA_001473245.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,751
Refseq Category na
Seq Rel Date 2015/12/21
Spanned Gaps 0
Species Taxid 2218628
SSU Count 0
Submitter University of New Hampshire
Taxid 141679
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJPB00000000.1