Enterobacter roggenkampii
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter roggenkampii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter roggenkampii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; x__Enterobacter cloacae complex; s__Enterobacter roggenkampii
NCBI Strain Identifiers SMART_763
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001729805.1)
Genome Characteristics
CheckM Completeness 99.07%
CheckM Contamination 1.05%
CheckM Strain Heterogeneity 9.09
5S Count 1
16S Count 9
23S Count 1
tRNA Count 19
Contig Count 81
N50 Contigs 173,605 bp
Longest Contig 509,889 bp
Scaffold Count 81
N50 Scaffolds 173,605 bp
Longest Scaffold 509,889 bp
Genome Size 5,190,480 bp
Protein Count 4,931
Coding Density 89.19%
GC Percentage 55.58%
Ambiguous Bases N/A
GTDB representative GCA_001729805.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SMART_763.v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04252929
Country Venezuela
Date 2015-12-21
Genbank Assembly Accession GCA_001472715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,090
Refseq Category na
Seq Rel Date 2015/12/21
Spanned Gaps 0
Species Taxid 1812935
SSU Count 8
Submitter JCVI
Taxid 1812935
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPPF00000000.1