Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers FDAARGOS_135
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 2.1%
CheckM Strain Heterogeneity 93.94
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 6
N50 Contigs 2,884,359 bp
Longest Contig 2,884,359 bp
Scaffold Count 6
N50 Scaffolds 2,884,359 bp
Longest Scaffold 2,884,359 bp
Genome Size 3,085,150 bp
Protein Count 2,957
Coding Density 83.06%
GC Percentage 32.73%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147169v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03996279
Country USA: DC
Date 2018-01-19
Genbank Assembly Accession GCA_001471695.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Swab
Latitude Longitude None
Molecule Count N/A
CDS Count 3,230
Refseq Category na
Seq Rel Date 2018/01/19
Spanned Gaps 0
Species Taxid 1280
SSU Count 6
Submitter University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center
Taxid 1280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOSC00000000.2