Staphylococcus capitis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
NCBI Strain Identifiers FDAARGOS_173
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002902325.1)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.36%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 4
N50 Contigs 1,495,377 bp
Longest Contig 1,495,377 bp
Scaffold Count 4
N50 Scaffolds 1,495,377 bp
Longest Scaffold 1,495,377 bp
Genome Size 2,602,552 bp
Protein Count 2,481
Coding Density 85.39%
GC Percentage 32.96%
Ambiguous Bases N/A
GTDB representative GCA_002902325.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147155v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03996314
Country USA: DC
Date 2018-01-19
Genbank Assembly Accession GCA_001471555.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source CVP blood
Latitude Longitude None
Molecule Count N/A
CDS Count 2,479
Refseq Category na
Seq Rel Date 2018/01/19
Spanned Gaps 0
Species Taxid 29388
SSU Count 7
Submitter University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center
Taxid 29388
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LORZ00000000.2