Achromobacter xylosoxidans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Achromobacter; s__Achromobacter xylosoxidans
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Alcaligenaceae; g__Achromobacter; s__Achromobacter xylosoxidans
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Alcaligenaceae; g__Achromobacter; s__Achromobacter xylosoxidans
NCBI Strain Identifiers FDAARGOS_133
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457475.1)
Genome Characteristics
CheckM Completeness 99.53%
CheckM Contamination 2.73%
CheckM Strain Heterogeneity 81.82
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 8
N50 Contigs 6,233,405 bp
Longest Contig 6,233,405 bp
Scaffold Count 8
N50 Scaffolds 6,233,405 bp
Longest Scaffold 6,233,405 bp
Genome Size 6,688,016 bp
Protein Count 6,152
Coding Density 89.74%
GC Percentage 67.57%
Ambiguous Bases N/A
GTDB representative GCA_001457475.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147153v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03996276
Country USA: DC
Date 2018-01-19
Genbank Assembly Accession GCA_001471535.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Sputum
Latitude Longitude None
Molecule Count N/A
CDS Count 6,128
Refseq Category na
Seq Rel Date 2018/01/19
Spanned Gaps 0
Species Taxid 85698
SSU Count 3
Submitter University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center
Taxid 85698
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOSD00000000.2