Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio vulnificus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio vulnificus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio vulnificus
NCBI Strain Identifiers FDAARGOS_116
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002224265.1)
Genome Characteristics
CheckM Completeness 99.73%
CheckM Contamination 0.05%
CheckM Strain Heterogeneity 0.0
5S Count 11
16S Count 11
23S Count 11
tRNA Count 20
Contig Count 2
N50 Contigs 3,224,241 bp
Longest Contig 3,224,241 bp
Scaffold Count 2
N50 Scaffolds 3,224,241 bp
Longest Scaffold 3,224,241 bp
Genome Size 4,950,612 bp
Protein Count 4,309
Coding Density 86.26%
GC Percentage 46.84%
Ambiguous Bases N/A
GTDB representative GCA_002224265.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM147130v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03996331
Country USA: FL
Date 2018-01-19
Genbank Assembly Accession GCA_001471305.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,493
Refseq Category na
Seq Rel Date 2018/01/19
Spanned Gaps 0
Species Taxid 672
SSU Count 11
Submitter University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center
Taxid 672
Total Gap Length 0
Translation Table 11
tRNA Count (total) 117
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOSI00000000.2