Haloferax sp001469865
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Halobacteriota; c__Halobacteria; o__Halobacteriales; f__Haloferacaceae; g__Haloferax; s__Haloferax sp001469865
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Halobacteria; o__Haloferacales; f__Haloferacaceae; g__Haloferax; s__
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Stenosarchaea group; c__Halobacteria; o__Haloferacales; f__Haloferacaceae; g__Haloferax; x__unclassified Haloferax; s__Haloferax sp. SB29
NCBI Strain Identifiers SB29
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.6%
CheckM Contamination 2.09%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 5
tRNA Count 20
Contig Count 716
N50 Contigs 16,292 bp
Longest Contig 68,196 bp
Scaffold Count 716
N50 Scaffolds 16,292 bp
Longest Scaffold 68,196 bp
Genome Size 3,830,759 bp
Protein Count 4,341
Coding Density 86.85%
GC Percentage 60.85%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146986v1
Assembly Type na
Bioproject PRJNA224116
Biosample SAMN04318427
Country Saudi Arabia: Discovery deep brine-seawater interface; Red Sea
Date 2015-12-18
Genbank Assembly Accession GCA_001469865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source brine-seawater interface
Latitude Longitude None
Molecule Count N/A
CDS Count 3,988
Refseq Category na
Seq Rel Date 2015/12/18
Spanned Gaps 0
Species Taxid 1544718
SSU Count 1
Submitter Red Sea Research Center, Saudi Arabia
Taxid 1544718
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOPV00000000.1