Sphingomonas sp000282895
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas; s__Sphingomonas sp000282895
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas; s__Sphingomonas sp. WG
NCBI Strain Identifiers WG
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000282895.1)
Genome Characteristics
CheckM Completeness 99.48%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 107
N50 Contigs 80,460 bp
Longest Contig 204,404 bp
Scaffold Count 107
N50 Scaffolds 80,460 bp
Longest Scaffold 204,404 bp
Genome Size 4,038,999 bp
Protein Count 3,786
Coding Density 91.05%
GC Percentage 65.89%
Ambiguous Bases N/A
GTDB representative GCA_000282895.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146984v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04272329
Country China
Date 2015-12-18
Genbank Assembly Accession GCA_001469845.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sea-mud
Latitude Longitude None
Molecule Count N/A
CDS Count 3,734
Refseq Category na
Seq Rel Date 2015/12/18
Spanned Gaps 0
Species Taxid 1592629
SSU Count 1
Submitter China University of Petroleum (East China)
Taxid 1592629
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNOS00000000.1