Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus velezensis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus amyloliquefaciens
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; x__Bacillus subtilis group; x__Bacillus amyloliquefaciens group; s__Bacillus amyloliquefaciens
NCBI Strain Identifiers Jxnuwx-1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001461825.1)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 1.19%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 48
N50 Contigs 321,522 bp
Longest Contig 675,501 bp
Scaffold Count 48
N50 Scaffolds 321,522 bp
Longest Scaffold 675,501 bp
Genome Size 4,089,321 bp
Protein Count 4,070
Coding Density 89.06%
GC Percentage 46.00%
Ambiguous Bases N/A
GTDB representative GCA_001461825.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146968v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04217165
Country China: Nanchang
Date 2015-12-18
Genbank Assembly Accession GCA_001469685.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source lobster sauces
Latitude Longitude None
Molecule Count N/A
CDS Count 4,061
Refseq Category na
Seq Rel Date 2015/12/18
Spanned Gaps 0
Species Taxid 1390
SSU Count 1
Submitter Jiangxi Normal University
Taxid 1390
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMAT00000000.1