Xanthomonas translucens
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens; x__Xanthomonas translucens pv. translucens
NCBI Strain Identifiers UPB787
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000331775.1)
Genome Characteristics
CheckM Completeness 99.34%
CheckM Contamination 0.86%
CheckM Strain Heterogeneity 14.29
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 763
N50 Contigs 12,865 bp
Longest Contig 65,983 bp
Scaffold Count 763
N50 Scaffolds 12,865 bp
Longest Scaffold 65,983 bp
Genome Size 4,544,764 bp
Protein Count 4,298
Coding Density 86.50%
GC Percentage 67.83%
Ambiguous Bases N/A
GTDB representative GCA_000331775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name XTT_UPB787_V1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03168416
Country Paraguay: Jica
Date 2015-12-18
Genbank Assembly Accession GCA_001469515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,197
Refseq Category na
Seq Rel Date 2015/12/18
Spanned Gaps 0
Species Taxid 343
SSU Count 1
Submitter XANTHOMIX
Taxid 134875
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTEM00000000.1