Enterobacter himalayensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter himalayensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter hormaechei
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; x__Enterobacter cloacae complex; s__Enterobacter hormaechei
NCBI Strain Identifiers ST3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002003685.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.23%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 10
23S Count 10
tRNA Count 20
Contig Count 75
N50 Contigs 127,987 bp
Longest Contig 295,957 bp
Scaffold Count 6
N50 Scaffolds 4,805,842 bp
Longest Scaffold 4,805,842 bp
Genome Size 4,815,521 bp
Protein Count 4,566
Coding Density 89.07%
GC Percentage 55.59%
Ambiguous Bases N/A
GTDB representative GCA_002003685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146941v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04219575
Country China: Guangdong; Shenzhen coast
Date 2015-12-18
Genbank Assembly Accession GCA_001469415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,558
Refseq Category na
Seq Rel Date 2015/12/18
Spanned Gaps 69
Species Taxid 158836
SSU Count 5
Submitter Graduate School at Shenzhen, Tsinghua University
Taxid 158836
Total Gap Length 16898
Translation Table 11
tRNA Count (total) 79
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMBL00000000.1