Xylella fastidiosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xylella; s__Xylella fastidiosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xylella; s__Xylella fastidiosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xylella; s__Xylella fastidiosa
NCBI Strain Identifiers CFBP8073
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000767565.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 330
N50 Contigs 67,596 bp
Longest Contig 247,073 bp
Scaffold Count 328
N50 Scaffolds 67,596 bp
Longest Scaffold 247,073 bp
Genome Size 2,582,150 bp
Protein Count 2,721
Coding Density 82.00%
GC Percentage 51.56%
Ambiguous Bases 41
GTDB representative GCA_000767565.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name XYFPCFBP8073
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04075659
Country France
Date 2015-12-18
Genbank Assembly Accession GCA_001469395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,569
Refseq Category na
Seq Rel Date 2015/12/18
Spanned Gaps 2
Species Taxid 2371
SSU Count 1
Submitter INRA
Taxid 2371
Total Gap Length 62
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LKES00000000.1