Staphylococcus epidermidis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis; x__Staphylococcus epidermidis FS1
NCBI Strain Identifiers FS1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742205.1)
Genome Characteristics
CheckM Completeness 98.87%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 91
N50 Contigs 53,637 bp
Longest Contig 139,835 bp
Scaffold Count 91
N50 Scaffolds 53,637 bp
Longest Scaffold 139,835 bp
Genome Size 2,551,451 bp
Protein Count 2,486
Coding Density 83.61%
GC Percentage 31.93%
Ambiguous Bases N/A
GTDB representative GCA_006742205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146933v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04304556
Country Denmark: Aarhus
Date 2015-12-18
Genbank Assembly Accession GCA_001469335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,487
Refseq Category na
Seq Rel Date 2015/12/18
Spanned Gaps 0
Species Taxid 1282
SSU Count 1
Submitter Aarhus University
Taxid 1008454
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOAT00000000.1