Listeria monocytogenes_B
Isolate HQ 5S/16S/23S 10 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers F4233
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000307025.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 10
Contig Count 46
N50 Contigs 180,172 bp
Longest Contig 376,134 bp
Scaffold Count 46
N50 Scaffolds 180,172 bp
Longest Scaffold 376,134 bp
Genome Size 3,013,808 bp
Protein Count 2,980
Coding Density 90.08%
GC Percentage 37.88%
Ambiguous Bases 20
GTDB representative GCA_000307025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name F4233
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02767551
Country USA: PA; Philadelphia
Date 2015-12-16
Genbank Assembly Accession GCA_001468565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,018
Refseq Category na
Seq Rel Date 2015/12/16
Spanned Gaps 0
Species Taxid 1639
SSU Count 1
Submitter Cornell University
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 13
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMUA00000000.1