Legionella_C spiritensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella_C; s__Legionella_C spiritensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella spiritensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella spiritensis
NCBI Strain Identifiers Mt.St.Helens-9
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_900186965.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.49%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 74
N50 Contigs 98,434 bp
Longest Contig 271,664 bp
Scaffold Count 35
N50 Scaffolds 301,316 bp
Longest Scaffold 559,478 bp
Genome Size 3,313,534 bp
Protein Count 2,959
Coding Density 88.78%
GC Percentage 45.38%
Ambiguous Bases N/A
GTDB representative GCA_900186965.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146816v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04274795
Country USA: Spirit Lake; Washington
Date 2015-12-15
Genbank Assembly Accession GCA_001468165.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Spirit Lake
Latitude Longitude None
Molecule Count N/A
CDS Count 2,969
Refseq Category representative genome
Seq Rel Date 2015/12/15
Spanned Gaps 39
Species Taxid 452
SSU Count 1
Submitter Tel Aviv University
Taxid 452
Total Gap Length 1396
Translation Table 11
tRNA Count (total) 40
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LNYX00000000.1