Legionella_C rubrilucens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella_C; s__Legionella_C rubrilucens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella rubrilucens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella rubrilucens
NCBI Strain Identifiers WA-270A-C2
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.97%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 43
N50 Contigs 267,771 bp
Longest Contig 591,525 bp
Scaffold Count 22
N50 Scaffolds 859,478 bp
Longest Scaffold 883,296 bp
Genome Size 3,129,674 bp
Protein Count 2,878
Coding Density 91.76%
GC Percentage 47.65%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146812v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04274791
Country USA: Los Angeles; California
Date 2015-12-15
Genbank Assembly Accession GCA_001468125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Tap water
Latitude Longitude None
Molecule Count N/A
CDS Count 2,860
Refseq Category representative genome
Seq Rel Date 2015/12/15
Spanned Gaps 21
Species Taxid 458
SSU Count 1
Submitter Tel Aviv University
Taxid 458
Total Gap Length 867
Translation Table 11
tRNA Count (total) 43
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LNYT00000000.1