Legionella sainthelensi
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella sainthelensi
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella sainthelensi
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella sainthelensi
NCBI Strain Identifiers Mt.St.Helens-4
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_900637685.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.57%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 96
N50 Contigs 142,825 bp
Longest Contig 261,033 bp
Scaffold Count 37
N50 Scaffolds 572,040 bp
Longest Scaffold 787,142 bp
Genome Size 4,108,128 bp
Protein Count 3,535
Coding Density 86.18%
GC Percentage 36.97%
Ambiguous Bases N/A
GTDB representative GCA_900637685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146810v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04274792
Country USA: Mt. St. Helens; Washington
Date 2015-12-15
Genbank Assembly Accession GCA_001468105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Spring water
Latitude Longitude None
Molecule Count N/A
CDS Count 3,530
Refseq Category na
Seq Rel Date 2015/12/15
Spanned Gaps 59
Species Taxid 28087
SSU Count 1
Submitter Tel Aviv University
Taxid 28087
Total Gap Length 1887
Translation Table 11
tRNA Count (total) 44
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LNYV00000000.1