Legionella_C quinlivanii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella_C; s__Legionella_C quinlivanii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella quinlivanii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella quinlivanii
NCBI Strain Identifiers CDC#1442-AUS-E
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (4 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.75%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 49
N50 Contigs 177,280 bp
Longest Contig 543,841 bp
Scaffold Count 27
N50 Scaffolds 666,687 bp
Longest Scaffold 1,158,071 bp
Genome Size 3,546,255 bp
Protein Count 3,034
Coding Density 90.27%
GC Percentage 42.98%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146797v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04274790
Country Australia
Date 2015-12-15
Genbank Assembly Accession GCA_001467975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Water in bus air conditioner
Latitude Longitude None
Molecule Count N/A
CDS Count 3,002
Refseq Category representative genome
Seq Rel Date 2015/12/15
Spanned Gaps 22
Species Taxid 45073
SSU Count 2
Submitter Tel Aviv University
Taxid 45073
Total Gap Length 687
Translation Table 11
tRNA Count (total) 41
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LNYS00000000.1