Legionella cincinnatiensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella cincinnatiensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella cincinnatiensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella cincinnatiensis
NCBI Strain Identifiers CDC#72-OH-14
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900452415.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 101
N50 Contigs 97,254 bp
Longest Contig 390,119 bp
Scaffold Count 54
N50 Scaffolds 337,180 bp
Longest Scaffold 602,394 bp
Genome Size 4,053,879 bp
Protein Count 3,500
Coding Density 85.61%
GC Percentage 36.77%
Ambiguous Bases N/A
GTDB representative GCA_900452415.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146754v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04274769
Country USA: Cincinnati; Ohio
Date 2015-12-15
Genbank Assembly Accession GCA_001467545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Human lung tissue
Latitude Longitude None
Molecule Count N/A
CDS Count 3,481
Refseq Category na
Seq Rel Date 2015/12/15
Spanned Gaps 47
Species Taxid 28085
SSU Count 2
Submitter Tel Aviv University
Taxid 28085
Total Gap Length 1711
Translation Table 11
tRNA Count (total) 41
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LNXX00000000.1