Legionella_C birminghamensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella_C; s__Legionella_C birminghamensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella birminghamensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella birminghamensis
NCBI Strain Identifiers CDC#1407-AL-14
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900452515.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 3.61%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 71
N50 Contigs 101,986 bp
Longest Contig 407,103 bp
Scaffold Count 54
N50 Scaffolds 202,516 bp
Longest Scaffold 655,066 bp
Genome Size 3,737,655 bp
Protein Count 3,265
Coding Density 89.71%
GC Percentage 43.46%
Ambiguous Bases N/A
GTDB representative GCA_900452515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146750v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04274765
Country USA: Alabama
Date 2015-12-15
Genbank Assembly Accession GCA_001467505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Lung biopsy
Latitude Longitude None
Molecule Count N/A
CDS Count 3,200
Refseq Category representative genome
Seq Rel Date 2015/12/15
Spanned Gaps 17
Species Taxid 28083
SSU Count 2
Submitter Tel Aviv University
Taxid 28083
Total Gap Length 972
Translation Table 11
tRNA Count (total) 41
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LNXT00000000.1