GCF_001467105.1
Pseudomonas_E amygdali
Isolate HQ 5S/16S/23S 20 tRNAs
Genome Characteristics
CheckM Completeness 99.84%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 161
N50 Contigs 113,425 bp
Longest Contig 366,337 bp
Scaffold Count 161
N50 Scaffolds 113,425 bp
Longest Scaffold 366,337 bp
Genome Size 6,037,605 bp
Protein Count 5,370
Coding Density 88.70%
GC Percentage 58.38%
Ambiguous Bases 73
GTDB representative GCA_002699855.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146710v1
Assembly Type na
Bioproject PRJNA224116
Biosample SAMN04092435
Country New Zealand
Date 2015-12-15
Genbank Assembly Accession GCA_001467105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source kiwi fruit
Latitude Longitude None
Molecule Count N/A
CDS Count 5,610
Refseq Category na
Seq Rel Date 2015/12/15
Spanned Gaps 0
Species Taxid 317
SSU Count 1
Submitter New Zealand Institute for Plant & Food research
Taxid 1208100
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LKCH00000000.1