Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. smithia
NCBI Strain Identifiers JF4097
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.42%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 100.0
5S Count 8
16S Count 8
23S Count 3
tRNA Count 20
Contig Count 344
N50 Contigs 28,949 bp
Longest Contig 109,615 bp
Scaffold Count 344
N50 Scaffolds 28,949 bp
Longest Scaffold 109,615 bp
Genome Size 4,307,636 bp
Protein Count 4,553
Coding Density 86.35%
GC Percentage 58.69%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146644v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03396265
Country Austria
Date 2015-12-15
Genbank Assembly Accession GCA_001466445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,425
Refseq Category na
Seq Rel Date 2015/12/15
Spanned Gaps 0
Species Taxid 645
SSU Count 14
Submitter Universite Laval
Taxid 80745
Total Gap Length 0
Translation Table 11
tRNA Count (total) 95
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JZTI00000000.1