Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
NCBI Strain Identifiers Y567
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 6
23S Count 10
tRNA Count 20
Contig Count 47
N50 Contigs 217,341 bp
Longest Contig 448,101 bp
Scaffold Count 47
N50 Scaffolds 217,341 bp
Longest Scaffold 448,101 bp
Genome Size 4,554,843 bp
Protein Count 4,177
Coding Density 87.08%
GC Percentage 58.89%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146643v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03395036
Country India
Date 2015-12-15
Genbank Assembly Accession GCA_001466435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,118
Refseq Category na
Seq Rel Date 2015/12/15
Spanned Gaps 0
Species Taxid 645
SSU Count 12
Submitter Universite Laval
Taxid 645
Total Gap Length 0
Translation Table 11
tRNA Count (total) 114
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JZTG00000000.1