Chlamydophila pecorum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Verrucomicrobiota_A; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydophila; s__Chlamydophila pecorum
Filtered NCBI Taxonomy d__Bacteria; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia pecorum
Unfiltered NCBI Taxonomy d__Bacteria; x__PVC group; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; x__Chlamydia/Chlamydophila group; g__Chlamydia; s__Chlamydia pecorum
NCBI Strain Identifiers NSW/Bov/SBE;SBE;Bov;NSW
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000204135.1)
Genome Characteristics
CheckM Completeness 98.98%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 2
N50 Contigs 687,828 bp
Longest Contig 687,828 bp
Scaffold Count 2
N50 Scaffolds 687,828 bp
Longest Scaffold 687,828 bp
Genome Size 1,106,395 bp
Protein Count 945
Coding Density 92.44%
GC Percentage 41.07%
Ambiguous Bases N/A
GTDB representative GCA_000204135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146641v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03253048
Country Australia:New South Wales
Date 2015-12-15
Genbank Assembly Accession GCA_001466415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Brain
Latitude Longitude None
Molecule Count N/A
CDS Count 945
Refseq Category na
Seq Rel Date 2015/12/15
Spanned Gaps 0
Species Taxid 85991
SSU Count 1
Submitter University of the Sunshine Coast
Taxid 85991
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWHE00000000.1