Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Paratyphi B
NCBI Strain Identifiers 2012CEB4337SAL
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 7
23S Count 12
tRNA Count 20
Contig Count 115
N50 Contigs 103,639 bp
Longest Contig 370,796 bp
Scaffold Count 115
N50 Scaffolds 103,639 bp
Longest Scaffold 370,796 bp
Genome Size 5,025,883 bp
Protein Count 4,800
Coding Density 87.23%
GC Percentage 51.90%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146636v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04110137
Country France: department 56
Date 2015-12-14
Genbank Assembly Accession GCA_001466365.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source guinea fowl pie (raw)
Latitude Longitude None
Molecule Count N/A
CDS Count 5,068
Refseq Category na
Seq Rel Date 2015/12/14
Spanned Gaps 0
Species Taxid 28901
SSU Count 15
Submitter Texas Tech University
Taxid 57045
Total Gap Length 0
Translation Table 11
tRNA Count (total) 83
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LKJK00000000.1