Listeria monocytogenes_B
Isolate HQ 5S/16S/23S 11 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers L1254
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000307025.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 11
Contig Count 59
N50 Contigs 152,605 bp
Longest Contig 474,642 bp
Scaffold Count 59
N50 Scaffolds 152,605 bp
Longest Scaffold 474,642 bp
Genome Size 3,123,034 bp
Protein Count 3,134
Coding Density 90.29%
GC Percentage 37.89%
Ambiguous Bases N/A
GTDB representative GCA_000307025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146602v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02769890
Country None
Date 2015-12-14
Genbank Assembly Accession GCA_001466025.1
Genome Category Isolate
Genome Representation full
Isolate L1254
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,164
Refseq Category na
Seq Rel Date 2015/12/14
Spanned Gaps 0
Species Taxid 1639
SSU Count 1
Submitter Centers for Disease Control and Prevention
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 14
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNFI00000000.1