Pseudoalteromonas translucida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Alteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas translucida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas translucida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas translucida; x__Pseudoalteromonas translucida KMM 520
NCBI Strain Identifiers KMM 520
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.87%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 10
23S Count 10
tRNA Count 20
Contig Count 2
N50 Contigs 3,390,388 bp
Longest Contig 3,390,388 bp
Scaffold Count 2
N50 Scaffolds 3,390,388 bp
Longest Scaffold 3,390,388 bp
Genome Size 4,147,593 bp
Protein Count 3,676
Coding Density 87.23%
GC Percentage 40.10%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM146529v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03380229
Country Japan
Date 2015-12-11
Genbank Assembly Accession GCA_001465295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source seawater
Latitude Longitude None
Molecule Count 2
CDS Count 3,659
Refseq Category representative genome
Seq Rel Date 2015/12/11
Spanned Gaps 0
Species Taxid 166935
SSU Count 9
Submitter Shandong University
Taxid 1315283
Total Gap Length 0
Translation Table 11
tRNA Count (total) 107
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None