Listeria monocytogenes
Isolate HQ 5S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers 2932
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187225.1)
Genome Characteristics
CheckM Completeness 98.9%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 0
23S Count 1
tRNA Count 20
Contig Count 12
N50 Contigs 482,234 bp
Longest Contig 640,274 bp
Scaffold Count 12
N50 Scaffolds 482,234 bp
Longest Scaffold 640,274 bp
Genome Size 2,857,459 bp
Protein Count 2,818
Coding Density 90.06%
GC Percentage 37.87%
Ambiguous Bases N/A
GTDB representative GCA_900187225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146399v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04074749
Country Australia
Date 2015-12-9
Genbank Assembly Accession GCA_001463995.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source meat food production facility
Latitude Longitude None
Molecule Count N/A
CDS Count 2,849
Refseq Category na
Seq Rel Date 2015/12/09
Spanned Gaps 0
Species Taxid 1639
SSU Count 0
Submitter Teagasc Food Research Centre
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJPE00000000.1