Aurantimonas manganoxydans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Aurantimonas; s__Aurantimonas manganoxydans
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Aurantimonadaceae; g__Aurantimonas; s__Aurantimonas manganoxydans
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Aurantimonadaceae; g__Aurantimonas; s__Aurantimonas manganoxydans; x__Aurantimonas manganoxydans SI85-9A1
NCBI Strain Identifiers DSM 21871
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000153465.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 94
N50 Contigs 161,406 bp
Longest Contig 397,172 bp
Scaffold Count 94
N50 Scaffolds 161,406 bp
Longest Scaffold 397,172 bp
Genome Size 4,248,252 bp
Protein Count 3,969
Coding Density 88.04%
GC Percentage 66.80%
Ambiguous Bases N/A
GTDB representative GCA_000153465.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146386v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00028747
Country None
Date 2015-11-9
Genbank Assembly Accession GCA_001463865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,913
Refseq Category na
Seq Rel Date 2015/11/09
Spanned Gaps 0
Species Taxid 651183
SSU Count 1
Submitter Graduate School of Life Sciences, Tohoku University
Taxid 287752
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BBWP00000000.1