Aurantimonas coralicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Aurantimonas; s__Aurantimonas coralicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Aurantimonadaceae; g__Aurantimonas; s__Aurantimonas coralicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Aurantimonadaceae; g__Aurantimonas; s__Aurantimonas coralicida
NCBI Strain Identifiers DSM 14790
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000421645.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.54%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 93
N50 Contigs 181,777 bp
Longest Contig 397,304 bp
Scaffold Count 93
N50 Scaffolds 181,777 bp
Longest Scaffold 397,304 bp
Genome Size 4,603,216 bp
Protein Count 4,358
Coding Density 87.79%
GC Percentage 66.73%
Ambiguous Bases N/A
GTDB representative GCA_000421645.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146382v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00028746
Country None
Date 2015-11-9
Genbank Assembly Accession GCA_001463825.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,299
Refseq Category na
Seq Rel Date 2015/11/09
Spanned Gaps 0
Species Taxid 182270
SSU Count 1
Submitter Graduate School of Life Sciences, Tohoku University
Taxid 182270
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BBWN00000000.1