Klebsiella variicola
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella variicola
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella variicola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella variicola
NCBI Strain Identifiers 50878013
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000828055.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.78%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 108
N50 Contigs 350,094 bp
Longest Contig 620,238 bp
Scaffold Count 108
N50 Scaffolds 350,094 bp
Longest Scaffold 620,238 bp
Genome Size 5,826,331 bp
Protein Count 5,493
Coding Density 87.85%
GC Percentage 56.96%
Ambiguous Bases N/A
GTDB representative GCA_000828055.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146368v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04158326
Country Norway
Date 2015-12-09
Genbank Assembly Accession GCA_001463685.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urine
Latitude Longitude None
Molecule Count N/A
CDS Count 5,742
Refseq Category na
Seq Rel Date 2015/12/09
Spanned Gaps 0
Species Taxid 244366
SSU Count 4
Submitter Norwegian National Advisory Unit on Detection of Antimicrobial Resistance
Taxid 244366
Total Gap Length 0
Translation Table 11
tRNA Count (total) 83
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNIR00000000.1