Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers 50834782
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 99.26%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 208
N50 Contigs 99,133 bp
Longest Contig 232,409 bp
Scaffold Count 208
N50 Scaffolds 99,133 bp
Longest Scaffold 232,409 bp
Genome Size 5,399,839 bp
Protein Count 5,212
Coding Density 88.24%
GC Percentage 57.26%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146341v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04158321
Country Norway
Date 2015-12-09
Genbank Assembly Accession GCA_001463415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Rectal swab
Latitude Longitude None
Molecule Count N/A
CDS Count 5,472
Refseq Category na
Seq Rel Date 2015/12/09
Spanned Gaps 0
Species Taxid 573
SSU Count 3
Submitter Norwegian National Advisory Unit on Detection of Antimicrobial Resistance
Taxid 573
Total Gap Length 0
Translation Table 11
tRNA Count (total) 73
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNIM00000000.1