Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers 50572569
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.79%
CheckM Strain Heterogeneity 9.52
5S Count 7
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 170
N50 Contigs 95,673 bp
Longest Contig 273,333 bp
Scaffold Count 170
N50 Scaffolds 95,673 bp
Longest Scaffold 273,333 bp
Genome Size 5,833,342 bp
Protein Count 5,514
Coding Density 88.04%
GC Percentage 56.86%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146290v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04158292
Country Norway
Date 2015-12-09
Genbank Assembly Accession GCA_001462905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Rectal swab
Latitude Longitude None
Molecule Count N/A
CDS Count 5,800
Refseq Category na
Seq Rel Date 2015/12/09
Spanned Gaps 0
Species Taxid 573
SSU Count 1
Submitter Norwegian National Advisory Unit on Detection of Antimicrobial Resistance
Taxid 573
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNHJ00000000.1