Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Proteus; s__Proteus mirabilis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Proteus; s__Proteus mirabilis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Proteus; s__Proteus mirabilis
NCBI Strain Identifiers PM593
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000160755.1)
Genome Characteristics
CheckM Completeness 96.22%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 146
N50 Contigs 57,115 bp
Longest Contig 166,132 bp
Scaffold Count 146
N50 Scaffolds 57,115 bp
Longest Scaffold 166,132 bp
Genome Size 3,954,353 bp
Protein Count 3,630
Coding Density 85.75%
GC Percentage 38.94%
Ambiguous Bases N/A
GTDB representative GCA_000160755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146238v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03154486
Country Ireland: Dublin
Date 2015-12-8
Genbank Assembly Accession GCA_001462385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source abdominal wound swab
Latitude Longitude 53.340899 N 6.295074 W
Molecule Count N/A
CDS Count 3,639
Refseq Category na
Seq Rel Date 2015/12/08
Spanned Gaps 0
Species Taxid 584
SSU Count 1
Submitter Trinity College Dublin
Taxid 584
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JSUP00000000.1