Xanthomonas translucens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
NCBI Strain Identifiers XT5791
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000331775.1)
Genome Characteristics
CheckM Completeness 99.43%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 173
N50 Contigs 66,228 bp
Longest Contig 175,057 bp
Scaffold Count 154
N50 Scaffolds 84,126 bp
Longest Scaffold 261,078 bp
Genome Size 4,539,587 bp
Protein Count 3,909
Coding Density 86.23%
GC Percentage 68.05%
Ambiguous Bases N/A
GTDB representative GCA_000331775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146214v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04279071
Country Canada
Date 2015-12-8
Genbank Assembly Accession GCA_001462145.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,890
Refseq Category na
Seq Rel Date 2015/12/08
Spanned Gaps 19
Species Taxid 343
SSU Count 1
Submitter Kansas State University
Taxid 343
Total Gap Length 1900
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNVV00000000.1