Xanthomonas translucens
Isolate MQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
NCBI Strain Identifiers LB10
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000331775.1)
Genome Characteristics
CheckM Completeness 99.83%
CheckM Contamination 6.98%
CheckM Strain Heterogeneity 97.83
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 122
N50 Contigs 124,783 bp
Longest Contig 274,775 bp
Scaffold Count 117
N50 Scaffolds 131,142 bp
Longest Scaffold 368,153 bp
Genome Size 4,884,200 bp
Protein Count 4,199
Coding Density 86.46%
GC Percentage 68.10%
Ambiguous Bases N/A
GTDB representative GCA_000331775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146200v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04279077
Country USA: North Dakota
Date 2015-12-8
Genbank Assembly Accession GCA_001462005.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,182
Refseq Category na
Seq Rel Date 2015/12/08
Spanned Gaps 5
Species Taxid 343
SSU Count 1
Submitter Kansas State University
Taxid 343
Total Gap Length 500
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNVN00000000.1