Xanthomonas translucens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
NCBI Strain Identifiers CR31
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000331775.1)
Genome Characteristics
CheckM Completeness 99.66%
CheckM Contamination 1.15%
CheckM Strain Heterogeneity 85.71
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 308
N50 Contigs 67,741 bp
Longest Contig 164,415 bp
Scaffold Count 306
N50 Scaffolds 67,741 bp
Longest Scaffold 164,415 bp
Genome Size 4,719,727 bp
Protein Count 4,197
Coding Density 86.38%
GC Percentage 67.95%
Ambiguous Bases N/A
GTDB representative GCA_000331775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146192v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04279082
Country USA: North Dakota
Date 2015-12-8
Genbank Assembly Accession GCA_001461925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,128
Refseq Category na
Seq Rel Date 2015/12/08
Spanned Gaps 2
Species Taxid 343
SSU Count 1
Submitter Kansas State University
Taxid 343
Total Gap Length 200
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNVJ00000000.1