Altererythrobacter_A marensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Altererythrobacter_A; s__Altererythrobacter_A marensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Erythrobacteraceae; g__Altererythrobacter; s__Altererythrobacter marensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Erythrobacteraceae; g__Altererythrobacter; s__Altererythrobacter marensis
NCBI Strain Identifiers DSM 21428
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001028625.1)
Genome Characteristics
CheckM Completeness 99.48%
CheckM Contamination 0.85%
CheckM Strain Heterogeneity 40.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 14
N50 Contigs 915,391 bp
Longest Contig 1,253,461 bp
Scaffold Count 14
N50 Scaffolds 915,391 bp
Longest Scaffold 1,253,461 bp
Genome Size 2,902,055 bp
Protein Count 2,723
Coding Density 92.17%
GC Percentage 64.66%
Ambiguous Bases N/A
GTDB representative GCA_001028625.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146188v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04226661
Country South Korea: Jeju; Mara Island
Date 2015-12-8
Genbank Assembly Accession GCA_001461885.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source seawater
Latitude Longitude 33.1 N 126.18299999999999 E
Molecule Count N/A
CDS Count 2,709
Refseq Category na
Seq Rel Date 2015/12/08
Spanned Gaps 0
Species Taxid 543877
SSU Count 1
Submitter Second Institute of Oceanography, State Oceanic Administration
Taxid 543877
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LMVG00000000.1