Acetivibrio_A ethanolgignens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Lachnospirales; f__Lachnospiraceae; g__Acetivibrio_A; s__Acetivibrio_A ethanolgignens
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Ruminococcaceae; g__Acetivibrio; s__Acetivibrio ethanolgignens
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Ruminococcaceae; g__Acetivibrio; s__Acetivibrio ethanolgignens
NCBI Strain Identifiers ACET-33324
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.33%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 284
N50 Contigs 45,085 bp
Longest Contig 123,583 bp
Scaffold Count 229
N50 Scaffolds 47,584 bp
Longest Scaffold 163,531 bp
Genome Size 3,660,245 bp
Protein Count 3,667
Coding Density 88.31%
GC Percentage 40.99%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146103v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04229414
Country China:Shenzhen
Date 2015-12-4
Genbank Assembly Accession GCA_001461035.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source gastrointestinal tract
Latitude Longitude None
Molecule Count N/A
CDS Count 3,652
Refseq Category representative genome
Seq Rel Date 2015/12/04
Spanned Gaps 55
Species Taxid 290052
SSU Count 1
Submitter BGI-shenzhen
Taxid 290052
Total Gap Length 625
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNAM00000000.1