Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers KPEI-1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.27%
CheckM Strain Heterogeneity 30.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 61
N50 Contigs 235,354 bp
Longest Contig 593,519 bp
Scaffold Count 61
N50 Scaffolds 235,354 bp
Longest Scaffold 593,519 bp
Genome Size 5,389,601 bp
Protein Count 5,058
Coding Density 88.21%
GC Percentage 57.41%
Ambiguous Bases 22
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM146097v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03223201
Country Netherlands: Groningen
Date 2015-12-04
Genbank Assembly Accession GCA_001460975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source patient room
Latitude Longitude 53.13 N 6.33 E
Molecule Count N/A
CDS Count 5,378
Refseq Category na
Seq Rel Date 2015/12/04
Spanned Gaps 0
Species Taxid 573
SSU Count 1
Submitter unverisity medical center groningen
Taxid 573
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JUBJ00000000.1