Helicobacter_C typhlonius
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter_C; s__Helicobacter_C typhlonius
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter typhlonius
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter typhlonius
NCBI Strain Identifiers 1
GTDB Type Material Designation not type material
GTDB Representative of Species True (6 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.31%
CheckM Contamination 1.82%
CheckM Strain Heterogeneity 57.14
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 1,920,832 bp
Longest Contig 1,920,832 bp
Scaffold Count 1
N50 Scaffolds 1,920,832 bp
Longest Scaffold 1,920,832 bp
Genome Size 1,920,832 bp
Protein Count 1,914
Coding Density 90.65%
GC Percentage 38.85%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name htyphlonius_mit97-6810
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3507300
Country None
Date 2015-11-20
Genbank Assembly Accession GCA_001460635.1
Genome Category Isolate
Genome Representation full
Isolate 1
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 1,870
Refseq Category representative genome
Seq Rel Date 2015/11/20
Spanned Gaps 0
Species Taxid 76936
SSU Count 2
Submitter LEIDEN UNIVERSITY MEDICAL CENTER
Taxid 76936
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None