Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers KPOI-3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.27%
CheckM Strain Heterogeneity 20.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 65
N50 Contigs 424,647 bp
Longest Contig 750,549 bp
Scaffold Count 64
N50 Scaffolds 424,647 bp
Longest Scaffold 750,549 bp
Genome Size 5,398,855 bp
Protein Count 5,065
Coding Density 88.21%
GC Percentage 57.42%
Ambiguous Bases 2
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146056v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03223195
Country Netherlands: Groningen
Date 2015-12-04
Genbank Assembly Accession GCA_001460565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sputum
Latitude Longitude 53.13 N 6.33 E
Molecule Count N/A
CDS Count 5,389
Refseq Category na
Seq Rel Date 2015/12/04
Spanned Gaps 1
Species Taxid 573
SSU Count 1
Submitter unverisity medical center groningen
Taxid 573
Total Gap Length 31
Translation Table 11
tRNA Count (total) 76
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JUBI00000000.1