Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers KP-11U
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 33.33
5S Count 5
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 65
N50 Contigs 184,237 bp
Longest Contig 471,921 bp
Scaffold Count 62
N50 Scaffolds 184,237 bp
Longest Scaffold 471,921 bp
Genome Size 5,221,338 bp
Protein Count 4,906
Coding Density 88.35%
GC Percentage 57.55%
Ambiguous Bases 26
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM146050v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03223203
Country Netherlands: Groningen
Date 2015-12-04
Genbank Assembly Accession GCA_001460505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Perineum
Latitude Longitude 53.13 N 6.33 E
Molecule Count N/A
CDS Count 5,202
Refseq Category na
Seq Rel Date 2015/12/04
Spanned Gaps 3
Species Taxid 573
SSU Count 1
Submitter unverisity medical center groningen
Taxid 573
Total Gap Length 162
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JUBL00000000.1