Clostridium butyricum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium butyricum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium butyricum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium butyricum
NCBI Strain Identifiers NEC8
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742065.1)
Genome Characteristics
CheckM Completeness 94.2%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 6
23S Count 7
tRNA Count 20
Contig Count 26
N50 Contigs 364,199 bp
Longest Contig 798,411 bp
Scaffold Count 26
N50 Scaffolds 364,199 bp
Longest Scaffold 798,411 bp
Genome Size 4,742,905 bp
Protein Count 5,312
Coding Density 81.83%
GC Percentage 28.66%
Ambiguous Bases 1
GTDB representative GCA_006742065.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CBut
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3146292
Country None
Date 2014-02-12
Genbank Assembly Accession GCA_001458815.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,306
Refseq Category na
Seq Rel Date 2014/02/12
Spanned Gaps 0
Species Taxid 1492
SSU Count 6
Submitter URMITE
Taxid 1492
Total Gap Length 0
Translation Table 11
tRNA Count (total) 73
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CBYK000000000.1